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General Resources
About CCA

Targeting Cholangiocarcinoma
August 2020: All patients with a biopsy should have next-generation sequencing. – [Read More]

FDA priority review for bile duct
May 2020: Incyte’s new drug pemigatinib has been given a priority review for – [Read More]
NIH - NCI
Abbreviations
  • AE, adverse events;
  • APCs, antigen presenting cells;
  • ASPH, aspartate-β-hydroxylase;
  • BTC, biliary tract cancers;
  • CCA, cholangiocarcinoma;
  • cDC, classical DCs;
  • CR, complete response;
  • CSF1R, colony stimulating factor 1 receptor;
  • CTLA-4, cytotoxic T-lymphocyte-associated protein 4;
  • CTLs, cytotoxic T lymphocytes;
  • dCCA, distal cholangiocarcinoma;
  • DCs, dendritic cells;
  • DCR, disease control rate;
  • DoR, duration of response;
  • ECM, extracellular matrix;
  • EVs, extracellular vesicles;
  • FDA, food and drug administration;
  • GM-CSF, granulocyte macrophage colony-stimulating factor;
  • HCC, hepatocellular carcinoma;
  • ICB, immune checkpoint blockade;
  • iCCA, intrahepaticcholangiocarcinoma;
  • IDO, indoleamine 2,3-dioxygenase;
  • IHC, immunohistochemistry;
  • IL-interleukin;
  • iNOS, inducible nitric oxide synthase;
  • KC, Kupffer cells;
  • MDSCs, myeloid-derived suppressor cells;
  • M-MDSC, monocyte-MDSCs;
  • MUC1, mucin 1;
  • NLR, neutrophil-lymphocyte ratio;
  • NK, natural killer;
  • NKG2D, natural killer group 2D;
  • ORR, objective response rate;
  • OS, overall survival;
  • pCCA, perihilar cholangiocarcinoma;
  • PD-1, programmed death 1;
  • pDC, plasmacytoid DCs;
  • PD-L1, programmed death ligand 1;
  • PFS, progression free survival;
  • PMN, polymorphonuclear;
  • PMN-MDSCs, polymorphonuclear-MDSCs;
  • PR, partial response;
  • PSC, primary sclerosing cholangitis;
  • TAMs, tumor-associated macrophages;
  • TILs, tumor-infiltrating lymphocytes;
  • TIME, tumor immune microenvironment;
  • TMB, tumor mutational burden;
  • TGFβ, transforming growth factor β;
  • TNF, tumor necrosis factor;
  • Treg, regulatory T cells;
  • VEGF, vascular endothelial factor;
  • WT1, Wilms tumor 1
Keywords
  • Distal cholangiocarcinoma,
  • immune checkpoint blockade,
  • immune cold CCA,
  • immune hot CCA,
  • intrahepatic cholangiocarcinoma,
  • perihilar cholangiocarcinoma
NIH - NCI
Kate Kelly - ASCO
Targeting Mismatch Repair

Future Looks Brighter for Treatment of Cholangiocarcinoma

AS WITH OTHER gastrointestinal cancers, about 2.5% of cholangiocarcinomas have mismatch repair (MMR) deficiency, which makes them a target for programmed cell death protein 1 (PD-1) inhibitors. In small subsets of cholangiocarcinoma in two KEYNOTE trials, outcomes of treatment with pembrolizumab (Keytruda) were positive.
Among 86 patients in KEYNOTE-016 with mismatch repair– deficient tumors, 4 patients had cholangiocarcinoma; the overall response rate was 53%, with 21% being complete responses; 2-year overall survival was 64%.6 Among 94 patients with mismatch repair–deficient tumors enrolled in KEYNOTE-158, there were 9 patients with cholangiocarcinoma; the overall response rate was 37%, and as of the latest report, the median duration of response had not been reached. Testing for MMR deficiency is now indicated in cholangiocarcinoma, Dr. Kelley said.

Kate Kelly - ASCO
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Effective Content Tagline here

4 lines to describe the “Articles” Content. Include link ie Gastroenterology.
Also include relevant video ID (see below -“x29hY6_8bDg”)
Replace the  URL “The Patient Collective” and Button title  “The Patient Collective” in the code section above.

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4H,

SOURCE: HELEN SCOTT
WHERE WE ARE AT NOW WITH CCA
A Science Direct Article
Helen highlights table 3 – Clinical trials image within in the Doc.

Cholangiocarcinoma (CCA) is the most common biliary malignancy and the second most common primary hepatic malignancy after hepatocellular carcinoma (HCC). CCAs are heterogeneous biliary epithelial tumors that are classified into intrahepatic (iCCA), perihilar (pCCA), and distal (dCCA) subtypes based on their anatomic location within the biliary tree.

The overall incidence of CCA, particularly iCCA, has increased over recent decades. Unfortunately, the 5-year overall survival (OS) for CCA remains less than 10%.  Surgical resection or liver transplantation following neoadjuvant chemoradiation are potentially curative treatment options for the subset of patients who present with early-stage disease.2 However, diagnosing CCA at an early stage remains a significant challenge, and the majority of patients present with advanced stage disease.
PDF link 

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London
This is a test container and image floating left. An expanded description  – [read more]

Education

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Patient Stories
Surgery
Oncology
Surgery
Oncology
Study: Chemotherapy
Study:  Immunotherapy
Study: Combination Treatments
Clinical Trials – Immuno

Originated from a reply to Lisa Mitchell
25 June 2020 Post Link : CCTargetedTherapy

Ok Lisa this is how I would approach your choices.
(1) Three are traditional Chemotherapy treatment options – historically at best they will manage the growth.
(2) One is a targeted Trial – Phase 1 /b – This has attracted FDA approval for Cholangiocarcinoma which is very good and has had encouraging commentary with an equally aggressive cancer cohort – Triple-negative Breast Cancer

Based on a quick research overview of the trial and a press releases (below), I personally would go all-in on the trial TT-00420, as it has a potential curative outcome. The word curative is not mentioned, but nor was it mentioned in the phase 1 trials of Keytruda, which was also an ”Interventional” treatment.

Lisa this is just my thoughts, with the intention of challenging or helping your decision making – I hope it doesn’t overload you. – Steve

QUICK RESEARCH OVERVIEW

Reference Link
Company Announcement
Nov 06, 2019
TransThera Biosciences Lead Product TT-00420 Granted Orphan Drug Designation from FDA to Treat Cholangiocarcinoma
http://www.transtherabio.com/en/newsview.aspx?class=179…
Dr. Frank Wu, Founder and CEO of TransThera, commented: “Cholangiocarcinoma lacks effective therapies and remains a huge unmet medical need around the world. TT-00420 has demonstrated great potential in multiple experiments. We believe that today’s orphan drug designation will help accelerate the development of this potential product in the clinical trials and bring meaningful benefits to cholangiocarcinoma patients. We are very excited about this news, which expands the horizon of our lead product in development. In addition to triple-negative breast cancer, cholangiocarcinoma is identified by our scientists to be the second indication for TT-00420.”

TT-00420 is in the global Phase I trial both in the US and China. Dose expansion Phase Ib/II trials in cholangiocarcinoma and triple-negative breast cancer are planned to start in 2020.

Reference link
Article Nov 09 0219
FDA Grants Orphan Drug Designation to TT-00420 for Treatment of Cholangiocarcinoma
https://www.targetedonc.com/…/fda-grants-orphan-drug…
TT-00420, an investigational spectrum-selective multiple kinase inhibitor received an orphan drug designation from the FDA for the treatment of cholangiocarcinoma, TransThera Biosciences Co. Ltd announced in a press release.

Reference Link
Article Excerpt
Interesting observation
“TT-00420 works not only effectively as a single agent but also synergistically with immuno-checkpoint inhibitors such as PD-1. This opens many exciting avenues to explore its huge potential.”
https://www.prnewswire.com/…/transthera-biosciences…

Reference link
Phase 1 Trial: Jan 8, 2019
Advance solid tumors
Oral multi-target drug
https://clinicaltrials.gov/ct2/show/NCT03654547
Safety of TT-00420 Monotherapy in Patients With Advanced Solid Tumors and Triple-Negative Breast Cancer
This is a first-in-human, phase I clinical research study with TT-00420, an investigational, oral, multi-target, dual mechanism kinase inhibitor targeting both mitosis and tumor micro-environment, for the treatment of triple-negative breast cancer (TNBC) and other advanced solid tumors.
Explanations to assist comprehension

What is TT-00420? – A dual-targeting inhibitor drug

What is Monotherapy? – Means a single drug /action – in this case, it means drug.

What is Dual Mechanism? – Means a drug that is targeting two targets. TT-00420 targets (1) Mitosis (2) TME Tumor Environment

What is Mitosis? – Means the cycle of cell division and growth.

What is TME? – This means the environment around the tumor ie the blood vessels /supply

What is Kinase? – A type of enzyme (protein) that in simple terms speeds up the metabolising of sugars or proteins molecules. It does this by adding chemicals called phosphates. This process causes the molecules within the cell to activate or deactivate cell signaling, which encourages more metabolism, cell division (mitosis), and cell survival.

What is a multiple kinase inhibitor? – Drugs that inhibit or interfere with the Kinase cell signaling that instruct metabolism, cell division, and cell survival.
Simply these inhibitors are designed to prevent cancer cells from continuing to grow (Mitosis). They can also block the growth of new blood vessels that tumors rely on to grow(TME).

What is an Orphan drug? – Drugs and or treatments that are more highly focused on rare cancers, ie a cancer that impacts less than 200,000 people as a measure in the USA population. These treatments have limited appeal outside of this. As of 2010, there are 7000 designated orphan drugs approved by the FDA, of which 200 are deemed as effective and become treatable.

Kate Kelly – Patient ONE

View 028 Article
KEYNOTE-028 Trial Unveils Biomarkers Linked to Pembrolizumab Efficacy

KEYNOTE-028 trial is a single-arm, phase Ib basket trial 

“This interesting study adds to the growing body of literature regarding potential biomarkers for response to immune checkpoint inhibitors,

View 028 Article
View 2016 Article

Anti–PD-1/PD-L1 Antibodies

Make Strong Showing in Gastrointestinal Cancers

ASCO Post Article  2016
Source Originated from Patient Story
KEYTRUDA – WHAT A 40% RESPONSE RATE HAS MEANT TO ME.
Posted by: TCF Blog Team on Tuesday, February 14th, 2017
Bill Drake

Refers to Keynote Trial 028 Results 
“In relapsed/refractory metastatic esophageal cancer, the KEYNOTE-028 trial evaluated pembrolizumab at 10 mg/kg every 2 weeks.3 The study restricted enrollment to patients who stained positive for the PD-1 ligand, PD-L1, defined as expression in at least 1% of tumor or inflammatory cells or positive bands in the stroma.”

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Trial Criteria
Keynote 158

Merck Sharp & Dohme Corp.

Trial Criteria
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Keytruda Side Effects 

List 

Along with its needed effects, a medicine may cause some unwanted effects. Although not all of these side effects may occur, if they do occur they may need medical attention. Check with your doctor or nurse immediately if any of the following side effects occur:

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This is a high quality lecture

Bullet Points

  • Immunotherapy teaches the T Cells -if the cancer comes back the T Cells will remember
  • Some patients who have completed other chemo trials maybe very weakened immune and may not respond as well
  • Colorectal Cancers tend to be high TMB which yields Msi-High and better PD-L1 expression and PD-1 response Approx 30 mins in on the video
  • CTLA- 4 Cured 20%
  • PD-L1 was much higher
  • Cure and Cancer in the same sentence

Beyond the Blockade

UW Video
Published on May 19, 2018

A seismic shift has occurred recently in cancer therapy. Multiple agents that unleash the adaptive immune response against tumors have been FDA-approved and found to induce remarkable results in a subset of patients with advanced cancers. The mechanistic basis for these checkpoint inhibitor therapies and new agents in development that could augment their activity will be discussed. After viewing this lecture, participants should be able to: 1. List the 4 main steps involved in inducing a durable and effective adaptive immune response. 2. Explain how checkpoint blockade enhances immune responses to tumors. 3. List at least 3 effects that IL-15 has or doesn’t have on lymphocytes that make it an attractive immunotherapy agent. Chihiro Morishima, MD Director, Research Testing Services Co-Director, Clinical Immunology Laboratory Associate Professor, Department of Laboratory Medicine University of Washington

Steve Notes for highlight

  • 38 mins: Who will respond? – CD8 + T Cell Infiltration in tumours is a sign for successful Immunotherapy
  • 38:30 – Whilst PD-L1 is a great biomarker it turns out the patients who do not have PD-l1 can still respond to Check point Inhibitors

Clinical Trials – Chemo
Clinical Trials: Combo
Grants, Fellowships and Researchers

Grant into Rare Cancer Awarded
December 10, 2021
New research into rare and neglected cancers to accelerate the pace of new treatment discoveries is always priority for the AGITG. The Idea Generation Workshops identify areas of unmet need or gaps in research, and enable the development of AGITG-led clinical trials to fill these gaps.

To address this gap, AGITG collaborated with Pancare Foundation to host the 2021 Cholangiocarcinoma Idea Generation Workshop…continue reading 

Also

The 2021 Cholangiocarcinoma Idea Generation Workshop
May 27, 2021
The third Idea Generation Workshop was held virtually on Friday 14 May, facilitated by Associate Professor Lara Lipton and Associate Professor Mehrdad Nikfarjam. This workshop was held in collaboration with Pancare Foundation.

At this workshop, ideas focused on gaps in current knowledge or ideas for future clinical trials in cholangiocarcinoma, with concepts presented across medical oncology and surgery…continue reading 

Psyhcology
Microbiome & Food
Presentations
Caregivers & Advocates
Orgs, Groups and Govt
Survival Stats and Updates
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Survival Rates

Source: Cancer.net

The 5-year survival rate tells you what percent of people live at least 5 years after the cancer is found. Percent means how many out of 100. The 5-year survival rate for people with early-stage extrahepatic bile duct cancer is 30%. If the cancer has spread to the regional lymph nodes, the 5-year survival rate is 24%. If the cancer has spread to a distant part of the body, the 5-year survival rate is 2%.

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VIEW DATA

OVERALL

SOURCE: SEERS DATABASE

Where do these numbers come from?
The American Cancer Society relies on information from the SEER* database, maintained by the National Cancer Institute (NCI), to provide survival statistics for different types of cancer.

  1. Localized: There is no sign that the cancer has spread outside of the gallbladder. This would include AJCC stage I (1) and stage II (2) cancers.
  2. Regional: The cancer has spread outside the gallbladder to nearby structures or lymph nodes. This would include stage III (3) and some stage IV (4) cancers in the AJCC system.
  3. Distant: The cancer has spread to distant parts of the body, such as the lungs. This would include some stage IV (4) cancers.
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OVERALL SURVIVAL

SOURCE: MEDICINE NET

How well a patient does after the diagnosis of bile duct cancer depends upon many factors, including where the tumor is located, if and how much it has spread, and the patient’s underlying general health. Patients have a better prognosis the farther away from the liver hilum the tumor is located, and according to certain aspects of shape and cell type within the tumor. Prognosis is worse for those patients whose tumor has invaded adjacent tissues, has lymph node involvement, or has spread to distant places in the body.

If untreated, bile duct cancer survival is 50% at one year, 20% at two years, and 10% at three years with virtually no survival at five years.

Being able to completely remove the tumor increases survival but this mostly depends upon the location of the tumor and whether it has invaded other tissues.

Read Bills Story

BILL DRAkE

What keytruda did for me

Posted by: TCF Blog Team on Tuesday, February 14th, 2017
By Bill Drake, Target Cancer Foundation Advocacy Council Member

On September 11, 2013 I was diagnosed with an adenocarcinoma malignant tumor on my esophagus at my GI junction, inside my GI specialist’s office on Cape Cod. I was there for my routine “over 50” colonoscopy.

Read Bills Story
Early Detection

Cancer Antigen  19 -9
Also Known As Carbohydrate Antigen 19-9 Cancer Antigen-GI CA-GI CA 19-9
https://labtestsonline.org/tests/cancer-antigen-19-9

What is being tested?
Cancer antigen 19-9 (CA 19-9) is a protein that exists on the surface of certain cancer cells. CA 19-9 does not cause cancer; rather, it is shed by the tumor cells and can be detected by laboratory tests in blood and sometimes other body fluids. This test measures the level of CA19-9.

Since CA 19-9 can be measured in blood, it is useful as a tumor marker to follow the course of the cancer. CA 19-9 is elevated in about 70% to 95%…Read More

How is the test used?
The CA 19-9 test may be used, along with other tests such as carcinoembryonic antigen (CEA), bilirubin, and/or a liver panel, to help evaluate and monitor a person who has been diagnosed with pancreatic cancer and is undergoing treatment.

CA 19-9 is used as a tumor marker:

To monitor response to pancreatic cancer treatment and/or cancer progression
To watch for pancreatic cancer recurrence
Sometimes to aid in the diagnosis of pancreatic cancer
CA 19-9 can only be used as a tumor marker if the cancer is producing elevated amounts of it. Since CA 19-9 is elevated in about 65% of those with bile duct cancer (cholangiocarcinoma), it may be ordered to help evaluate and monitor people with this type of cancer.

The CA 19-9 test is not sensitive or specific enough to use as a screening test for cancer. It is not currently useful for detection or diagnosis by itself because non-cancerous conditions can cause elevated CA 19-9 levels. Researchers continue to investigate markers to be used alone or in combination with CA 19-9 that may be more useful for screening for and detecting pancreatic cancer in the early stages, when it is most treatable.

IHC Testing
Genomic Profiling
dMMR
Science Direct
MMR Genes and MSi-h Status

Content Title goes hereThe aim of this study was to assess the performance of immunohistochemistry using antibodies for MLH1, MSH2, MSH6 and PMS2 mismatch repair gene proteins against microsatellite instability (MSI) testing.

Immunohistochemistry offers an alternative method for assessment of MSI status which is fast and relatively inexpensive compared with MSI testing. We achieved a sensitivity rate of 92% and specificity of 99.8% for immunohistochemistry testing assessed against the MSI testing. It has to be accepted that a small fraction of MSI-positive cases will be missed by testing with immuno-histochemistry alone.

Science Direct
IHC Staining
MMR Genes and MSi-h Status

Microsatellite instability is due to defects in the family of DNA repair genes, primarily hMLH1 and hMSH2,

This is an Ovarian view point

IHC Staining
NIH - NCI
What are tumor markers?

A tumor marker is anything present in or produced by cancer cells or other cells of the body in response to cancer or certain benign (noncancerous) conditions that provides information about a cancer, such as how aggressive it is, whether it can be treated with a targeted therapy, or whether it is responding to treatment.

NIH - NCI
NIH - NCI

MMR 4 Key Genes

NIH Highlights the 4 Key MMR Genes  – Article Titled – Deficient mismatch repair: Read all about it (Review)

NIH - NCI
View Arrticle - ncbi.nlm

DNA mismatch repair (MMR) is a very highly conserved cellular process, involving many proteins, resulting in the identification, and subsequent repair of mismatched bases, likely to have arisen during DNA replication, genetic recombination or chemical or physical damage (Fig. 1). The MMR genes play additional roles in double-strand break repair, apoptosis and recombination. The four key genes identified to date are mutL homologue 1 (MLH1), mutS homologue 2 (MSH2), mutS homologue 6 (MSH6) and postmeiotic segregation increased 2 (PMS2), so named because of their homology to the E. coli MMR genes.

View Arrticle - ncbi.nlm
NIH - NCI

VERY GOOD EXPLANATION VIDEO

ALSO SEE NIH  – highlights the 4 key genes: Deficient mismatch repair: Read all about it (Review)

NIH - NCI
View Article

OncLive

Good article for CRC – Trial
Key takaeaway

  1. dMMR often shows High TMB (in particular MSI-h)
  2. dMMR is qualifier ie one MLH1 Gene expression absent
  3. MSI-High and dMMR are different – ie one or more gene expression absence is dMMR – MSI-high requires min of 2
  4. MSI leads to higher antigen expression and Lymphocytes (B or T Cell) responses
  5. Inflamed tumors displayHIGHER PD-L1 Activity

“This trial was based on the data that were generated on patients with metastatic disease in whom immune checkpoint inhibitors were shown to be very active—patients whose tumors had dMMR,” Sinicrope said in an interview with OncologyLive®. “Due to their remarkable results in this subset of colorectal cancers, we decided that perhaps this therapy would also be of benefit to an earlier stage of disease, namely, the stage III population that gets adjuvant chemotherapy following a potentially curative resection.”

DNA mismatch repair (MMR) is the mechanism by which cells repair damaged DNA, including insertions, deletions, and misincorporations of nucleotides during DNA replication.2 MMR deficiency is detected in approximately 15% of colorectal cancers (CRC) and leads to microsatellite instability (MSI) and a high burden of mutations which trigger the expression of neoantigens that attract lymphocytes to the tumor. Inflamed tumors have been shown to respond favorably to immune checkpoint inhibitors; therefore, anti–PD-1/PD-L1 agents constitute an attractive treatment option in patients with dMMR tumors.3 Among stage III colon cancers, approximately 11% are dMMR positive, according to Sinicrope, who is a gastroenterologist, internist, and oncologist at Mayo Clinic in Rochester, Minnesota.

Snippet
Investigators are enrolling patients whose tumors have MSI due to dMMR. In ATOMIC, dMMR status serves as the biomarker predictive of response to atezolizumab. Patients’ tumor tissue is stained for the expression of 4 proteins—MLH1, MSH2, MSH6, and PMS2—that govern MMR. The absence of 1 or more of the proteins, as detected by immunohistochemical (IHC) staining, denotes dMMR.2 In contrast, a normal IHC test implies that all 4 MMR proteins are expressed and retained.4 Approximately 15% of CRCs have dMMR, and this rate decreases by stage.2

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MSH3

MSH3
Entrez Gene Summary for MSH3 Gene
The protein encoded by this gene forms a heterodimer with MSH2 to form MutS beta, part of the post-replicative DNA mismatch repair system. MutS beta initiates mismatch repair by binding to a mismatch and then forming a complex with MutL alpha heterodimer. This gene contains a polymorphic 9 bp tandem repeat sequence in the first exon. The repeat is present 6 times in the reference genome sequence and 3-7 repeats have been reported. Defects in this gene are a cause of susceptibility to endometrial cancer.

MSH3
ICI – Checkpoint Pathway
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CPS Scoring

Combined Positive Score

When pathologists and scientists at Agilent Technologies, maker of the companion diagnostic PD-L1 IHC 22C3 pharmDx, sought to develop a new scoring methodology, in collaboration with Merck, for gastric cancer patients’ tumor specimens a few years ago, luck and intuition turned out to be handy. As Agilent’s chief pathologist for companion diagnostics, Debra Hanks, MD, puts it, “Skill, science, and a smidgeon of serendipity” helped her team zero in on the best way to evaluate PD-L1 expression in gastric cancer patients…

The basic mechanism of PD-L1 is well understood: Tumor cells can use the PD-L1 immune cascade to turn off cytotoxic T-cells so the tumor can continue to grow; the antibody pembrolizumab blocks the PD-L1 so the cytotoxic T-cells can continue to stay active and attack the tumor. But “as we learn more and more about immunotherapy, what we’re finding is that different cancer types can express PD-L1 differently,” explains Dr. Hanks, who spoke with CAP TODAY…

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Kate Kelly - ASCO
Targeting Mismatch Repair

Future Looks Brighter for Treatment of Cholangiocarcinoma

AS WITH OTHER gastrointestinal cancers, about 2.5% of cholangiocarcinomas have mismatch repair (MMR) deficiency, which makes them a target for programmed cell death protein 1 (PD-1) inhibitors. In small subsets of cholangiocarcinoma in two KEYNOTE trials, outcomes of treatment with pembrolizumab (Keytruda) were positive.
Among 86 patients in KEYNOTE-016 with mismatch repair– deficient tumors, 4 patients had cholangiocarcinoma; the overall response rate was 53%, with 21% being complete responses; 2-year overall survival was 64%.6 Among 94 patients with mismatch repair–deficient tumors enrolled in KEYNOTE-158, there were 9 patients with cholangiocarcinoma; the overall response rate was 37%, and as of the latest report, the median duration of response had not been reached. Testing for MMR deficiency is now indicated in cholangiocarcinoma, Dr. Kelley said.

Kate Kelly - ASCO
View Video
Checkpoint Inhibitor pathways

Biomarker Based Companion Diagnostics Are Enabling Precision Oncology

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Video about PD-1

Incyte is developing a PD-1 antibody.

PD-1 is a protein expressed on multiple immune cells, including T cells, and acts as a key checkpoint in tumor-induced immune suppression.

Activation of PD-1 can reduce effector T-cell activity and facilitate regulatory T-cell formation, while down-regulating expression of anti-apoptotic molecules and pro-inflammatory cytokines. Blocking PD-1 can increase antitumor immunity through enhancing T-cell activity.

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Visit the Patient Collective
Content Title goes here

Effective Content Tagline here

4 lines to describe the “Articles” Content. Include link ie Gastroenterology.
Also include relevant video ID (see below -“x29hY6_8bDg”)
Replace the  URL “The Patient Collective” and Button title  “The Patient Collective” in the code section above.

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Bullet Points

  • Can now cure late stage metastatic cancer tumours
  • Blows all old ideas out the window.
  • Durable responses
Biomarkers
Mutations
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Article of 3 Videos

FGF and FGFR's

August 2nd 2019

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FGF in Action

Quality Video

Targeting FGFR Alterations

with a Selective FGFR Inhibitor

44mins:
Dr. Randi Isaacs

From the Cholangiocarcinoma Foundation’s 2015 Annual Conference.

Lon video  -did not watch much

  • There are 4 receptors and 22 ligands in the FGF family
  • looking foe a molecule inhibitor molecule
  • FGFR2  = GI and Breast
  • BGJ398 is exciting  -it is a potent “Pan-FGFR Inhibitor
Rachna Schroff
Targeted Oncology

Published on Jun 21, 2019
A discussion regarding the role of fibroblast growth factor receptors in tumor development and the frequency at which it occurs. For more resources and information regarding anticancer targeted therapies: http://targetedonc.com/

Rachna Schroff
Part One

Gold Biotechnology, Inc.
Published on Jun 1, 2015
This video provides an overview about fibroblast growth factors (FGFs) and their receptors (FGFRs). Here, Dr. David Ornitz, a professor of developmental biology at Washington University in St. Louis, School of Medicine, will address what FGFs and their receptors are, how the FGF-FGFR signal is regulated and how FGFs and their receptors regulate biological functions.

Part two of this video will be published in July, and will provide more information about diseases resulting from FGF and FGFR mutations.

Dr. Ornitz has published 168 scientific papers and 27 book chapters and reviews. You can visit his website at http://ornitzlab.wustl.edu

To access Dr. Ornitz’s paper “The Fibroblast Growth Factor Signaling Pathway,” visit http://onlinelibrary.wiley.com/doi/10….

Part One
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Crushing Once-Untreatable Cancers

By Targeting Each Patient’s Unique Tumor, Precision Medicine Is Crushing Once-Untreatable Cancers. But Only a Fraction of Patients Currently Benefit. Can Medicine Close the Gap?

Linda Boyed, for example, an energetic 52-year-old occupational therapist, was thrilled to be on vacation with her family in Hawaii, hitting the beaches and taking long walks. But she couldn’t shake a constant feeling of fatigue. By the time she returned home, near Columbus, Ohio, her skin had yellowed.

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What is

Fibroblast Growth Factor Receptor (FGFR)? Tagline

Oncology.TV
Published on Apr 29, 2014
Dr. Joel Neal from Stanford University Medical School talks about FGFR,

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FGFR2

Shomu on FGFR2
fgf signaling pathway – This lecture explains about fibroblast growth factor signaling using fibroblast growth factor receptor during cell cycle and cell division. Fibroblast growth factor acts like a growth hormone that adheres to the fibroblast growth factor receptor and helps to send the chemical signal inside the cell and activates the required transcription factor through a cell signaling pathway and it finally relay the signal inside the cell nucleus and helps in the transcription of the desired gene the product of which helps in the cell cycle and cell division.
For more information, log on to- www.shomusbiology.com/

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FGFR2

Ncbi – nih article

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BTC constitute epithelial malignancies of the biliary tree

Current knowledge, clinical candidates and future challenges

Biliary tract cancers (BTCs) are rare with poor prognosis. Due to the advent of genomic sequencing, new data have emerged regarding the molecular makeup of this disease. To add to the complexity, various subtypes also harbor a varied genetic composition. The commonly mutated genes associated with this cancer are KRAS, EGFR, IDH, FGFR and BAP1.

Immune check point inhibitors are currently being used across various poor prognostic tumor groups with good results; however, there is some association of programmed cell death protein ligand-1 (PD-L1), expression and effectiveness of these treatments.127,128 Expression of PD-L1 in BTC shows a wide range from 29% to 100%,129,130 and the full analysis of the KEYNOTE-028 study is still awaited. This Phase Ib trial is evaluating the effects of treatment with a monoclonal antibody against human immune cell check point programmed death 1 (PD-1), pembrolizumab in patients with previously pretreated advanced BTC who have PD-L1 expression.131 BTCs are infrequently associated with Lynch syndrome, a genetic disorder thatpredisposes to mic-rosatellite instability (MSI) and mismatch repair deficiency (MMR).17With the food and drug association (FDA) approval of pembrolizumab132 for MSI- and MMR-deficient tumors, in patients who have BTC associated with Lynch syndrome, there may be an option for treating them with immune check point inhibitors, where available..133

The role of immunomodulating treatments in BTC is still an area of exploration, and none of the current immune investigational drugs have been approved in this disease group. The expression of PD-L1 is a predictive biomarker in other tumor sites, such as non-small-cell lung cancer (NSCLC), for the efficacy of these immunotherapies. Apart from this biomarker, another recently emerging predictor of response is the human microbiome, where certain bacterial species are associated with clinical efficacy of immunotherapies.141

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Primary End Point Achieved

Agios Announces the Randomized Phase 3 ClarIDHy Trial of TIBSOVO® (ivosidenib) Achieved its Primary Endpoint in Previously Treated IDH1 Mutant Cholangiocarcinoma Patients – TIBSOVO® Demonstrated a Statistically Significant Improvement in Progression-Free Survival Compared to Placebo – “Advanced cholangiocarcinoma is a life-threatening disease with no currently approved treatment options,” said Chris Bowden, M.D., chief medical officer at Agios. “The data from the ClarIDHy Phase 3 trial demonstrate the clinically significant benefit of TIBSOVO® in patients with this challenging disease who harbor the IDH1 mutation.
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Explore IDH Mutations

Your Content Goes Here

EGFR is found on the surface of some normal cells and is involved in cell growth. It may also be found at high levels on some types of cancercells, which causes these cells to grow and divide. Blocking EGFR may keep cancer cells from growing. Some EGFR inhibitors are used to treat cancer.

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TumourMarkers in Common Use 

National Cancer Institute 

A tumor marker is anything present in or produced by cancer cells or other cells of the body in response to cancer or certain benign (noncancerous) conditions that provides information about a cancer, such as how aggressive it is, whether it can be treated with a targeted therapy, or whether it is responding to treatment. See the Tumor Markers fact sheet for more information.

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VERY GOOD

Student Lecture

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Antibodies Role Explained

Study.com

What Are Antibodies?
Antibodies, also known as immunoglobulins, are Y-shaped proteins that are produced by the immune system to help stop intruders from harming the body. When an intruder enters the body, the immune system springs into action. These invaders, which are called antigens, can be viruses, bacteria, or other chemicals. When an antigen is found in the body, the immune system will create antibodies to mark the antigen for the body to destroy.
Also see

Functions , How they beat Antigens, and Immunisations

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Antibodies

What are they?

Antibodies, also known as immunoglobulins, are Y-shaped proteins that are produced by the immune system to help stop intruders from harming the body. When an intruder enters the body, the immune system springs into action. These invaders, which are called antigens, can be viruses, bacteria, or other chemicals.

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Distinguish between antigens and antibodies

By Stephanie Castle

More from Stephanie Castle

Antigens are molecules capable of stimulating an immune response. Each antigen has distinct surface features, or epitopes, resulting in specific responses.

Antibodies (immunoglobins) are Y-shaped proteins produced by B cells of the immune system in response to exposure to antigens. Each antibody contains a paratope which recognizes a specific epitope on an antigen, acting like a lock and key binding mechanism.  This binding helps to eliminate antigens from the body, either by direct neutralization or by ‘tagging’ for other arms of the immune system.

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The Role of Antigens & Antibodies

in Vaccinations

Vaccines contain antigens which stimulate the B lymphocytes of the immune system to respond by producing plasma cells which secrete disease specific antibodies (Primary response). Some of the B cells become memory B cells, which will recognise future exposure to the disease. This results in a faster and more intense production of antibodies, which effectively work to eliminate the disease by binding to the antigens (Secondary response).

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Antigens

What are they?

Antigens are substances (usually proteins) on the surface of cells, viruses, fungi, or bacteria. Nonliving substances such as toxins, chemicals, drugs, and foreign particles (such as a splinter) can also be antigens. The immune system recognizes and destroys, or tries to destroy, substances that contain antigens. read more 

When an antigen enters the body, it stimulates the immune system to produce antibodies. (The immune system is the body’s natural defence system.) … The role of antibodies is to bind with antigens and inactivate them so that other bodily processes can take over, destroy, and remove the foreign substances from the body.

Cytokines

Cyctokines are a group of small cell signalling proteins for the immune system communication – proteins are secreted by one immune sell ie T Cell to communicate with another immune cell ie B Cell – there are 3 types of

  1. Autocrine – Communication is Self Seeding – Produces the cytokine Ligand and also has a cytokine receptor to receive the same signal
  2. Paracrine – Communication is Nearby – Produces the cytokine Ligand and binds to the receptor of a nearby cell
  3. Endocrine – Communication is is distal – Produces the cytokine Ligand and travels to a faraway point in the body and binds to the receptor of a distal cell
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4H,

SOURCE: HELEN SCOTT
WHERE WE ARE AT NOW WITH CCA
A Science Direct Article
Helen highlights table 3 – Clinical trials image within in the Doc.

Cholangiocarcinoma (CCA) is the most common biliary malignancy and the second most common primary hepatic malignancy after hepatocellular carcinoma (HCC). CCAs are heterogeneous biliary epithelial tumors that are classified into intrahepatic (iCCA), perihilar (pCCA), and distal (dCCA) subtypes based on their anatomic location within the biliary tree.

The overall incidence of CCA, particularly iCCA, has increased over recent decades. Unfortunately, the 5-year overall survival (OS) for CCA remains less than 10%.  Surgical resection or liver transplantation following neoadjuvant chemoradiation are potentially curative treatment options for the subset of patients who present with early-stage disease.2 However, diagnosing CCA at an early stage remains a significant challenge, and the majority of patients present with advanced stage disease.
PDF link 

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MONOCLONAL ANTIBODY

SOURCE - SHOMU
Cancer treatment using monoclonal antibody

Shomu’s Biology
Published on Jan 18, 2014
monoclonal antibody therapy – This cancer therapy video explains the methods of using monoclonal antibodies to treat cancer
For more information, log on to- http://shomusbiology.weebly.com/
Download the study materials here- https://www.shomusbiology.com/bio-materials.html

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Monoclonal Antibodies

What are they?

A type of protein made in the laboratory that can bind to substances in the body, including cancer cells. There are many kinds of monoclonal antibodies. Amonoclonal antibody is made so that it binds to only one substance. Monoclonal antibodies are being used to treat some types of cancer

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How do monoclonal

antibody drugs work?

Monoclonal antibodies are designed to function in different ways. A particular drug may actually function by more than one means. The role of the drug in helping the immune system may include the following:

Very good article covering all the variations in design ie Flagging, Triggering, Blocking

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Immunology wars:

Monoclonal antibodies

Our immune systems are at war with cancer. This animation reveals how monoclonal antibodies can act as valuable reinforcements to shore up our defences – and help battle cancer.

MD Anderson
Targeted Therapy page

Monoclonal antibodies are larger and work outside of cancer cells. They target molecules on the surface of the cancer cells or nearby. These are made using cloned cells that produce antibodies that interfere with the targeted molecule. Monoclonal antibodies also can be used to deliver a toxic molecule directly into a cancer cell.

MD Anderson
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MUTs animated 

Good Video shows MUTs working to repair

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Definition of 

MLHI PMS2 MSH6 are the 4 Key Genes

  • MLH1:
    MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) is a protein that in humans is encoded by the MLH1 gene located on chromosome 3. It is a gene commonly associated with hereditary nonpolyposis colorectal cancer.
  • PMS2

BEST Page is
Wiki: DNA mismatch repair
Describes all MUTs

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